BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB028A12SP1|AL428838
(835 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1506 1532 0.0
>3x_Contig1506
Length = 7652
Score = 1532 bits (766), Expect = 0.0
Identities = 813/835 (97%), Gaps = 2/835 (0%)
Strand = Plus / Minus
Query: 1 aaatgaaaaacagtgtatcwagggcaaactttgacattattttagccactgaaattttcc 60
||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||
Sbjct: 1383 aaatgaaaaacagtgtatcaagggcaaactttgacattatcttagccactgaaattttcc 1324
Query: 61 catacaaatcatctcccttcgctggtaagtcttgtgccataaaccttatcggctcatgtt 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1323 catacaaatcatctcccttcgctggtaagtcttgtgccataaaccttatcggctcatgtg 1264
Query: 121 gtgaaagaaaatagatgttggatgtggtagagatagaggattctcgaacagacgaggtgt 180
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1263 g--aaagaaaatagatgttggatgtggtagagatagaggattctcgaacagacgaggtgt 1206
Query: 181 gtcagcatcaagagagtctggacagttcagtaatgatgactctagatgctttaaagtgaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1205 gtcagcatcaagagagtctggacagttcagtaatgatgactctagatgctttaaagtgaa 1146
Query: 241 ttcgtcaatctcattaggtggttgaatcaacttctttttggtttccagccagtatggtaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1145 ttcgtcaatctcattaggtggttgaatcaacttctttttggtttccagccagtatggtaa 1086
Query: 301 ttcttccttgaaaagtgggttcttgaatgcyaacttatcttccaaatcctttgcgagtat 360
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 1085 ttcttccttgaaaagtgggttcttgaatgctaacttatcttccaaatcctttgcgagtat 1026
Query: 361 ttcttctatctcatgcgacaaatcctttggaggtggcagctcttctgtctgcggtgctgg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1025 ttcttctatctcatgcgacaaatcctttggaggtggcagctcttctgtctgcggtgctgg 966
Query: 421 ggtggattccytcyctttctttacyacggggttggcacctgaaathtgattcactgaaga 480
|||||||||| || |||||||||| |||||||||||||||||||| ||||||||||||||
Sbjct: 965 ggtggattccttctctttctttactacggggttggcacctgaaatttgattcactgaaga 906
Query: 481 tggaggcccatttgcacttacgccattagcagcagcaagggcagcagcagcggctgttga 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 905 tggaggcccatttgcacttacgccattagcagcagcaagggcagcagcagcggctgttga 846
Query: 541 agaaggcgaagtagcactagatacagtgctttggttaggagatttttccacattatyatc 600
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 845 agaaggcgaagtagcactagatacagtgctttggttaggagatttttccacattattatt 786
Query: 601 atcgtcatyagaagaggatgcgttggtggaggcatctgtaaccgcgtttgaggcagcagt 660
|| || || |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 785 attgttattagaagaggatgcgttggtggaggcatctgtaaccgcgtttgaggcagcagt 726
Query: 661 agcagccactgccgcagccactgccgcagccactgccgcasgcavgtggkgttcttgccc 720
|||||||||||||||||||||||||||||||||||||||| || | ||||||||||
Sbjct: 725 agcagccactgccgcagccactgccgcagccactgccgcaggcgcagtgggttcttgccc 666
Query: 721 attctcatgtgatggttgagctgcactagcaatcgatgtggcggtaatatcaggagagga 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 665 attctcatgtgatggttgagctgcactagcaatcgatgtggcggtaatatcaggagagga 606
Query: 781 agtctttgatttgaggcttaatggagcaggagaagcctttttccttggcgaacgt 835
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 605 agtctttgatttgaggcttaatggagcaggagaagcctttttccttggcgaacgt 551
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.712 1.32
Gapped
Lambda K H
1.39 0.712 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5415
Number of Sequences: 1807
Number of extensions: 5415
Number of successful extensions: 43
Number of sequences better than 1.0e-20: 1
length of query: 835
length of database: 10,358,551
effective HSP length: 16
effective length of query: 819
effective length of database: 10,329,639
effective search space: 8459974341
effective search space used: 8459974341
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (30.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.5 bits)